Table 7. List of polymorphic primer with predicted function based on sequence homology.

S. No.	Primer name	Motif	Predicted function based on sequence homology	No. of alleles	Range of amplification (bp)	PIC Value
Stress relevance unigenes containing SSR
1	DGR-37	TCT	peroxisome biogenesis protein 19-1-like	8	154–244	0.275
2	DGR-41	TTC	mitogen-activated protein kinase kinase kinase 3-like	6	154–260	0.346
3	DGR-48	CTT	mitogen-activated protein kinase kinase kinase 3-like	2	122–186	0.375
4	DGR-52	GGC	alternative oxidase	4	133–158	0.305
5	DGR-58	AAG	hydroxyproline-rich glycoprotein family	6	118–140	0.375
6	DGR-87	GAATT	aquaporin pip2-7	6	120–172	0.346
7	DGR-105	CA	malate dehydrogenase	4	152–198	0.375
8	DGR-114	TTC	wound-responsive family protein	12	154–372	0.351
9	DGR-128	AGTG	ethylene response protein	6	139–526	0.191
10	DGR-162	(ATT)6 (ATT)5	abscisic acid 8-hydroxylase	4	134–168	0.139
11	DGR-163	AGA	abscisic acid 8-hydroxylase	4	164–240	0.139
12	DGR-166	TTC	alcohol dehydrogenase-like protein	4	148–173	0.311
13	DGR-171	TAT	oxidation resistance protein	6	158–196	0.351
14	DGR-172	TTC	proline-rich family protein	6	148–170	0.375
15	DGR-174	(CAA)5 (GCA)7	hydroxyproline-rich glycoprotein family protein	6	160–285	0.370
16	DGR-179	(AG)7 (GA)8 (AG)6	heat stress transcription factor b-3-like	3	112–142	0.346
17	DGR-198	TTTTTC	casein kinase family protein	4	128–161	0.375
18	DGR-203	TC	gaba receptor-associated	3	257–284	0.346
19	DGR-216	AAG	3-epi-6-deoxocathasterone 23-monooxygenase-like	6	162–229	0.339
20	DGR-253	TA	glutamine synthetase	3	114–142	0.346
21	DGR-258	CT	lrr receptor-like serine threonine-protein kinase fei 1-like	6	137–153	0.375
22	DGR-282	AG	syntaxin-61-like	3	144–165	0.346
23	DGR-289	AG	tubby-like f-box protein 8-like	5	87–110	0.365
24	DGR-304	CT	ankyrin repeat domain-containing protein 13c-b-like	5	182–302	0.365
25	DGR-308	TC(8)	ankyrin repeat-rich protein	4	121–174	0.305
26	DGR-312	CT	c2h2-like zinc finger protein	4	152–172	0.375
27	DGR-316	TTTG	dof zinc finger	5	190–287	0.365
28	DGR-322	TCCAAC	ethylene-responsive transcription factor crf4-like	3	160–179	0.251
29	DGR-329	AGATC	gdsl esterase lipase at1g29670-like	6	243–374	0.314
30	DGR-335	AGA	heat shock protein sti-like	6	145–178	0.375
31	DGR-338	ATT	hypoxia-responsive family protein	4	100–153	0.028
32	DGR-361	(CT)7 (TCT)5	probable xyloglucan endotransglucosylase hydrolase protein 28-like	3	135–150	0.346
33	DGR-362	CTT	probable xyloglucan endotransglucosylase hydrolase protein 30-like	6	261–382	0.375
34	DGR-386	CTCAAT	vicilin 47k	7	240–371	0.370
Other functional unigenes containing SSR
35	DGR-146	AAGAG	senescence-inducible chloroplast stay-green protein	6	185–255	0.346
36	DGR-259	(ATA)6 (GA)7	mads transcription factor	4	110–148	0.375
37	DGR-263	TC	pfkb-type carbohydrate kinase family protein	6	160–243	0.372
38	DGR-294	TCT	udp-galactose transporter 1-like	8	138–186	0.305
39	DGR-301	(CCT)5 (TCT)7	alpha beta-hydrolases superfamily protein	5	154–271	0.356