Table 1.
New GO terms created to support detailed ASD-relevant annotations. The ancestral relationship of these new GO terms is described in Figs. 4 and 5 (with the exception of the new protein binding terms and ‘receptor localization to synapse’). The term records in the QuickGO browser (http://www.ebi.ac.uk/QuickGO) provide the full definition and ontology placement for each GO term provide the full definition and ontology placement for each GO term. The reference column lists the references used as a source of information when creating each term
New GO Term | GO ID | Reference |
---|---|---|
Synapse assembly terms | ||
Postsynaptic density assembly | GO:0097107 | [65] |
Postsynaptic density organization | GO:0097106 | [65] |
Postsynaptic membrane assembly | GO:0097104 | [39] |
Presynaptic membrane assembly | GO:0097105 | [56, 68] |
Presynaptic membrane organization | GO:0097090 | [49] |
Regulation of postsynaptic membrane potential terms | ||
Negative regulation of excitatory postsynaptic membrane potential | GO:0090394 | [49] |
Positive regulation of excitatory postsynaptic membrane potential | GO:2000463 | [77] |
Positive regulation of inhibitory postsynaptic membrane potential | GO:0097151 | [68] |
Protein clustering/localization terms | ||
Alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate receptor clustering | GO:0097113 | [35] |
Gamma-aminobutyric acid receptor clustering | GO:0097112 | [48] |
Gephyrin clustering involved in postsynaptic density assembly | GO:0097116 | [48] |
Guanylate kinase-associated protein clustering | GO:0097117 | [48] |
Neurexin clustering involved in presynaptic membrane assembly | GO:0097115 | [35] |
Neuroligin clustering involved in postsynaptic membrane assembly | GO:0097118 | [35] |
N-methyl-D-aspartate receptor clustering | GO:0097114 | [48] |
Postsynaptic density protein 95 clustering | GO:0097119 | [80] |
Receptor localization to synapse | GO:0097120 | [65] |
Protein binding terms | ||
Neuroligin family protein binding | GO:0097109 | [39] |
Scaffold protein binding | GO:0097110 | [80] |