Table 3.
Samples | 3pMXE | 5pMXE | A3SS | A3SS and ES | A5SS | A5SS and ES | Cassette Exon | ESx | IntronR | MXE | Total | Detected novel junctionx | AS/100 novel SJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C0 | 187 | 206 | 1220 | 35 | 941 | 35 | 136 | 328 | 3079 | 24 | 6191 | 21548 | 28.73 |
C1 | 190 | 204 | 1116 | 33 | 919 | 30 | 104 | 376 | 3361 | 18 | 6351 | 25492 | 24.91 |
C12 | 187 | 208 | 1138 | 43 | 933 | 38 | 86 | 1071 | 3983 | 17 | 7704 | 22870 | 33.69 |
Tsh0 | 201 | 249 | 1055 | 24 | 846 | 46 | 99 | 317 | 1931 | 16 | 4784 | 20909 | 22.88 |
Tsh1 | 183 | 213 | 1007 | 28 | 798 | 35 | 60 | 326 | 1970 | 5 | 4625 | 19957 | 23.17 |
Tsh12 | 188 | 233 | 1096 | 50 | 858 | 47 | 57 | 1143 | 2951 | 10 | 6633 | 23179 | 28.62 |
Total | 396 | 506 | 2953 | 102 | 2230 | 94 | 317 | 2091 | 8211 | 57 | 16957 | 75885 | 22.35 |
C0, C1 and C12 represent S. lycopersicum cold treatment for 0 h, 1 h and 12 h, respectively; Tsh0, Tsh1 and Tsh12 indicate S. habrochaites cold treatment for 0 h, 1 h and 12 h, respectively