Table I. Circulating human Oc fragments observed by MSIA in 130 samples from studies A–C.
Truncated Peptide (Descending MW) | Designation in Fig. 1 | aMALDI Obs. MH+Avg | Calc. MH+Avg | aESI Obs. MH+Mono | Calc. MH+Mono | bFractional Abundance (S.D.) |
---|---|---|---|---|---|---|
Y[1–49]V | A | 5798.4 | 5798.5 | 5794.65 | 5794.75 | 48.9 (9.9) |
Y[1–48]P | B | 5699.7 | 5699.3 | 5695.48 | 5695.68 | 4.6 (1.1) |
L[2–49]V | C | 5635.4 | 5635.3 | 5631.50 | 5631.68 | 3.6 (0.9) |
Y[3–49]V | D | 5522.5 | 5522.1 | 5518.46 | 5518.60 | 17.1 (4.2) |
Y[3–48]P | E | 5423.8 | 5423 | 5419.46 | 5419.53 | 4.7 (1.5) |
cpE[4–49]V | F | 5342.4 | 5342 | 5338.53 | 5338.52 | 11.4 (3.9) |
pE[4–48]P | G | 5242.3 | 5242.8 | 5239.35 | 5239.47 | 1.1 (0.5) |
d W[5–49]V | H | 5230.6 | 5230.8 | 5227.48 | 5227.48 | 1.6 (0.7) |
W[5–48]P | I | 5131.4 | 5131.7 | 5128.36 | 5128.41 | 1.7 (0.8) |
G[7–49]V | J | 4930.6 | 4931.5 | eN.O. | 4928.31 | 1.2 (1.0) |
Y[1–42]Y | K | 4921.4 | 4922.4 | N.O. | 4919.27 | 0.3 (0.5) |
fA[8–49]V | L | 4873.5 | 4874.4 | N.O. | 4871.29 | 2.3 (2.4) |
Y[1–41]A or L[2–42]Y | M | 4758.1 | 4759.3 | N.O. | 4756.21 | 1.5 (1.3) |
a For MALDI spectra MH+ designates the intact, protonated gas phase ion analyzed by the mass spectrometer. For ESI spectra it represents the charge state-deconvoluted mass of the protonated molecule. Since protein isotopes are not resolved by MALDI-MS, MH+Avg refers to the average molecular mass (in Da). Since protein isotopes are resolved by ESI-MS, MH+mono refers to the monoisotopic molecular mass (in Da). Observed mass values were taken from representative individual spectra. Multiple γ-carboxylated forms of each species were also observed by ESI.
b Fractional abundance as determined by MALDI-MSIA (which includes, but does not discriminate between all Gla-containing proteoforms); expressed as average percentage ± S.D. for all samples in Supplemental Fig. 5b (n = 130).
c pE = Pyroglutamic acid, formed spontaneously when Q was at the N-terminus.
d Previously observed as a product of MMP -1, -2, and -8 digestion of human Oc (41).
e N.O. indicates fragment not observed.