Table S2.
JPT | CHB | CHD | GIH | CEU | TSI | ASW | LWK | MKK | YRI | MEX | |
---|---|---|---|---|---|---|---|---|---|---|---|
GACGG | 0.355 | 0.351 | 0.347 | 0.233 | 0.244 | 0.335 | 0.286 | 0.289 | 0.231 | 0.287 | 0.394 |
CGCAC | 0.285 | 0.220 | 0.206 | 0.085 | |||||||
AACAG | 0.151 | 0.161 | 0.194 | 0.119 | 0.081 | 0.114 | 0.127 | 0.106 | 0.091 | 0.130 | 0.154 |
GGTAC | 0.128 | 0.179 | 0.135 | 0.142 | 0.162 | 0.114 | 0.103 | 0.167 | 0.154 | 0.087 | 0.106 |
GGCAG | 0.070 | 0.077 | 0.076 | ||||||||
GGCGG | 0.012 | 0.006 | 0.018 | 0.006 | |||||||
GACAG | 0.006 | 0.071 | 0.067 | 0.024 | 0.126 | 0.010 | |||||
AACGG | 0.006 | 0.017 | |||||||||
GGCGC | 0.012 | ||||||||||
AGCAG | 0.006 | ||||||||||
AACAC | 0.004 | ||||||||||
GACGC | 0.017 | 0.006 | 0.008 | 0.004 | |||||||
GGCAC | 0.009 | 0.008 | 0.003 | 0.019 | |||||||
AGTAC | 0.008 | ||||||||||
GGTGG | 0.014 | ||||||||||
GGTGC | 0.006 | 0.014 | 0.022 | 0.010 | |||||||
GACAC | 0.006 | 0.392 | 0.500 | 0.415 | 0.389 | 0.367 | 0.469 | 0.343 | 0.308 |
Note: Haplotype frequencies data were determined by the Haploview software program (version 4.2; Broad Institute, Cambridge, MA, USA) (http://www.broad.mit.edu/mpg/haploview/).
Abbreviations: ASW, African ancestry in southwest USA; CDH13, cadherin13; CEU, residents of UT, USA with Northern and Western European ancestry, from the Centre d’Etude du Polymorphisme Humain collection; CHB, Han Chinese in Beijing, People’s Republic of China; CHD, Chinese in metropolitan Denver, CO, USA; GIH, Gujarati Indians in Houston, TX, USA; JPT, Japanese in Tokyo, Japan; LWK, Luhya in Webuye, Kenya; MEX, Mexican ancestry in Los Angeles, CA, USA; MKK, Maasai in Kinyawa, Kenya; SNPs, single nucleotide polymorphisms; TSI, Tuscan in Italy; YRI, Yoruba in Ibadan, Nigeria.