Table 2.
OTUs generated after clustering the data for the Tagged Individuals Community using a 3% divergence threshold. Results are reported when singletons are excluded and included. The number of filtered reads that were clustered to form each OTU is reported.
| Tagged individual | Singletons excluded | Singletons included | ||||
|---|---|---|---|---|---|---|
| No. OTUs | Species matching OTU(s) | No. reads in OTU | No. OTUs | Species matching OTU(s) | No. reads in OTU | |
| Artemia salina | 1 | Artemia salina | 795 | 2 | Artemia salina | 962 |
| Artemia salina | 2 | |||||
| Balanus crenatus | 1 | Balanus crenatus | 6231 | 1 | Balanus crenatus | 6943 |
| Brachionus calyciflorus | 1 | Brachionus calyciflorus | 4 | |||
| Cancer spp. | 1 | Cancer spp. | 418 | 1 | Cancer spp. | 544 |
| Cercopagis pengoi | 1 | Cercopagis pengoi | 259 | 2 | Cercopagis pengoi | 327 |
| Cercopagis pengoi | 1 | |||||
| Ciona intestinalis | 1 | Ciona intestinalis | 726 | 2 | Ciona intestinalis | 1057 |
| Ciona intestinalis | 1 | |||||
| Corbicula fluminea | 2 | Corbicula fluminea | 23,420 | 4 | Corbicula fluminea | 25,497 |
| Corbicula fluminea | 3874 | Corbicula fluminea | 3883 | |||
| Corbicula fluminea | 24 | |||||
| Corbicula fluminea | 1 | |||||
| Daphnia mendotae | 1 | Daphnia mendotae | 62 | 1 | Daphnia mendotae | 84 |
| Diacyclops thomasi | 1 | Cyclops spp. | 158 | 1 | Cyclops spp. | 213 |
| Echinogammarus ischnus | 1 | Dikerogammarus villosus | 2947 | 1 | Dikerogammarus villosus | 3324 |
| Epischura lacustris | 1 | Epischura lacustris | 4209 | 1 | Epischura lacustris | 4969 |
| Leptodiaptomus ashlandi | 1 | Leptodiaptomus ashlandi | 1764 | 1 | Leptodiaptomus ashlandi | 2107 |
| Mesocyclops edax | 1 | Mesocyclops edax | 6 | 1 | Mesocyclops edax | 9 |
| Microsetella norvegica | 1 | Microsetella norvegica | 215 | 1 | Microsetella norvegica | 259 |
| Oikopleura labradoriensis | 1 | Oikopleura labradoriensis | 240 | 1 | Oikopleura labradoriensis | 375 |
| Palaemonetes spp. | 2 | Palaemonetes pugio | 3050 | 3 | Palaemonetes pugio | 3437 |
| Palaemonetes pugio | 6 | Palaemonetes pugio | 9 | |||
| Palaemonetes pugio | 1 | |||||
| Pleuroxus denticulatus | 1 | Pleuroxus truncatus | 76 | 1 | Pleuroxus truncatus | 102 |
| Themisto libellula | 1 | Themisto libellula | 2928 | 1 | Themisto libellula | 3383 |
| Senecella calanoides | 1 | Senecella calanoides | 26 | 1 | Senecella calanoides | 39 |