Table 4.
Expression of putative genes in MVA and MEP biosynthesis pathways.
| Pathway | Gene Name | Unigene | RPKM in Leaf | RPKM in Root |
|---|---|---|---|---|
| MVA | AACT1 | comp81670_c0 | 50.65 | 52.76 |
| AACT2 | comp86403_c0 | 13.16 | 38.43 | |
| HMGS | comp1196622_c0 | 0.00 | 0.49 | |
| HMGR1 | comp87249_c0 | 27.14 | 3.53 | |
| HMGR2 | comp92954_c0 | 35.56 | 17.08 | |
| HMGR3 | comp4296_c0 | 0.25 | 0.57 | |
| HMGR4 | comp25979_c0 | 0.57 | 0.04 | |
| HMGR5 | comp114241_c0 | 5.72 | 0.00 | |
| MK | comp83300_c0 | 20.74 | 16.19 | |
| PMK1 | comp371052_c0 | 0.55 | 0.48 | |
| PMK2 | comp82309_c1 | 2.21 | 1.23 | |
| PMK3 | comp82309_c0 | 3.94 | 2.21 | |
| PMK4 | comp92698_c0 | 8.08 | 11.20 | |
| MVD1 | comp86107_c0 | 51.01 | 39.76 | |
| MVD2 | comp73189_c0 | 0.55 | 0.58 | |
| IDI1 | comp81822_c0 | 114.79 | 89.95 | |
| IDI2 | comp67360_c0 | 37.65 | 31.50 | |
| IDI3 | comp92050_c0 | 49.18 | 2.79 | |
| MEP | DXS1 * | comp87916_c0 | 45.34 | 1.45 |
| DXS2 | comp89290_c0 | 10.85 | 3.64 | |
| DXS3 | comp93517_c0 | 48.69 | 35.56 | |
| DXR | comp92087_c3 | 123.96 | 107.04 | |
| MCT | comp67067_c0 | 36.76 | 8.28 | |
| MCS | comp91375_c0 | 56.61 | 36.13 | |
| HDS * | comp94424_c0 | 151.28 | 77.99 | |
| HDR1 | comp87777_c0 | 114.07 | 97.97 | |
| HDR2 | comp509208_c0 | 0.00 | 0.91 | |
| HDR3 | comp1116482_c0 | 0.00 | 0.36 |
* These genes were selected for qRT-PCR.