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. 2015 Apr 29;22(3):205–217. doi: 10.1093/dnares/dsv005

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© The Author 2015. Published by Oxford University Press on behalf of Kazusa DNA Research Institute.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 4. — Ratio of non-coding putatively functional variants (pfVars) with AA altering and splicing types at different allele frequency bins within selective sweep regions. The non-coding pfVars included intergenic, intronic, UTR and down/upstream variants from most conserved elements, variants located within known ncRNAs and variants that were predicted to alter RNA secondary structure. The graph indicates that high-frequency variants are enriched with non-coding types. BR, BEL and WEL refer to broiler, brown egg layer and white egg layer groups, respectively.