. 2015 Jun 11;5:11137. doi: 10.1038/srep11137

Table 1. Proteins with reduced abundance in PSC of Rpgr ^ko at 2 months. S1, S2, and S3 are the three biological repeat samples used in the present study.

				emPAI VALUES
Identified Proteins	Accession Number	Molecular Weight	Fold Change	C57 Mean S1 S2 S3	Rpgr^koMean S1 S2 S3
N-myc downstream-regulated gene 1	NDRG1_MOUSE	43 kDa	0.2	0.343- 0.312, 0.411, 0.306	0.076-0.073, 0.059, 0.0966
Protein Tfg	Q9Z1A1_MOUSE	43 kDa	0.2	0.343- 0.276, 0.355, 0.398	0.076- 0.071, 0.053, 0.1048
SEC14like protein 2	S14L2_MOUSE	46 kDa	0.2	0.316- 0.358, 0.275, 0.315	0.071- 0.069, 0.084, 0.06
26S proteasome nonATPase regulatory subunit 3	PSMD3_MOUSE	61 kDa	0.2	0.234- 0.256, 0.145, 0.301	0.0539- 0.0566, 0.038, 0.066
EH domain containing protein 4	EHD4_MOUSE	61 kDa	0.2	0.23- 0.18, 0.36, 0.15	0.053-0.051, 0.0399, 0.0686
Ubiquitin carboxyl-terminal hydrolase	E9PYI8_MOUSE	52 kDa	0.3	0.44- 0.32, 0.56, 0.44	0.129-0.097, 0.250, 0.04
Golgi reassembly stacking protein 2, isoform CRA_c	A2ATI6_MOUSE	37 kDa	0.3	0.291- 0.213, 0.442, 0.218	0.0889-0.0811, 0.0690, 0.1166
Insulin degrading enzyme	F6RPJ9_MOUSE	114 kDa	0.3	0.288- 0.251, 0.290, 0.323	0.088- 0.079, 0.080, 0.105
Septin2	SEPT2_MOUSE	42 kDa	0.3	0.257- 0.222, 0.321, 0.228	0.0793- 0.072, 0.063, 0.1022
Bardet-Biedl syndrome 4 protein homolog	BBS4_MOUSE	58 kDa	0.4	0.315- 0.306, 0.467, 0.172	0.116- 0.107, 0.120, 0.121
Isoform 2 of Transmembrane emp24 domain-containing protein 10	TMEDA_MOUSE	11 kDa	0.4	1.88- 1.89, 1.54, 2.21	0.698- 0.666, 0.723, 0.705
Cullin3	CUL3_MOUSE	89 kDa	0.4	0.287- 0.267, 0.345, 0.249	0.114- 0.108, 0.114, 0.12
Farnesyl pyrophosphate synthase	FPPS_MOUSE	41 kDa	0.4	0.598- 0.549, 0.668, 0.577	0.264- 0.237, 0.212, 0.343
26S protease regulatory subunit 10B	PRS10_MOUSE	44 kDa	0.4	0.538- 0.556, 0.413, 0.645	0.24- 0.18, 0.27, 0.27
T-complex protein 1 subunit zeta	TCPZ_MOUSE	58 kDa	0.4	1.04- 1.02, 1.06, 1.04	0.469- 0.447, 0.525, 0.435
GTP-binding nuclear protein Ran	RAN_MOUSE	24 kDa	0.5	1.45- 1.33, 1.59, 1.43	0.667- 0.612, 0.734, 0.655
Proliferation-associated protein 2G4	PA2G4_MOUSE	44 kDa	0.5	0.337- 0.333, 0.411, 0.267	0.156- 0.149, 0.155, 0.164
ATP-binding cassette subfamily F member 1	ABCF1_MOUSE	95 kDa	0.5	0.31- 0.29, 0.3, 0.34	0.145- 0.116, 0.178, 0.141
Guanine nucleotide-binding protein G(T) subunit gammaT1	GBG1_MOUSE	9 kDa	0.5	14.5- 13.8, 14.2, 15.5	6.8- 5.3, 6.9, 8.2
Prom1 protein	Q8R056_MOUSE	94 kDa	0.5	1.04- 1.03, 1.01, 1.08	0.502- 0.489, 0.623, 0.394
Glutathione S transferase P 1	GSTP1_MOUSE	24 kDa	0.5	1.87- 1.77, 1.82, 2.02	0.933- 0.899, 0.929, 0.971
Coatomer subunit beta	COPB_MOUSE	107 kDa	0.5	0.391- 0.313, 0.405, 0.455	0.197- 0.177, 0.2, 0.214
Isoform 2 of ADP ribosylation factor-like protein 6	ARL6_MOUSE	22 kDa	0.5	2.61- 2.57, 2.16, 3.1	1.36- 1.22, 1.48, 1.38
Isoform 3 of Glyoxalase domain containing protein 4	GLOD4_MOUSE	31 kDa	0.5	0.667- 0.606, 0.689, 0.706	0.359- 0.348, 0.377, 0.352
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta1	GBB1_MOUSE	37 kDa	0.5	30.9- 31.4, 30.2, 31.1	16.7- 15.9, 16.3, 17.9
Exportin2	XPO2_MOUSE	110 kDa	0.5	0.418- 0.402, 0.471, 0.381	0.226- 0.197, 0.228, 0.253
Cullin5	CUL5_MOUSE	91 kDa	0.5	0.28- 0.23, 0.3, 0.31	0.151- 0.146, 0.162, 0.145
26S proteasome non-ATPase regulatory subunit 1	PSMD1_MOUSE	106 kDa	0.5	0.237- 0.241, 0.209, 0.261	0.129- 0.116, 0.131, 0.14

Table 1. Proteins with reduced abundance in PSC of Rpgr ko at 2 months. S1, S2, and S3 are the three biological repeat samples used in the present study.

Table 1. Proteins with reduced abundance in PSC of Rpgr ^ko at 2 months. S1, S2, and S3 are the three biological repeat samples used in the present study.