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. 2015 Jun 11;5:11137. doi: 10.1038/srep11137

Table 3. Proteins with increased abundance in PSC of Rpgr ko at 2 months. S1, S2, and S3 are the three biological repeat samples used in the present study.

  emPAI VALUES
Identified Proteins Accession Number Molecular Weight Fold Change C57Mean S1 S2 S3 RpgrkoMean S1 S2 S3
Ubiquitin thio-esterase OTUB1 D3YWF6_MOUSE 28 kDa INF 0 0.565- 0.521, 0.577, 0.597
26S proteasome non-ATPase regulatory subunit 7 PSMD7_MOUSE 37 kDa INF 0 0.296- 0.278, 0.3, 0.31
Isoform 5 of Dynamin1like protein DNM1L_MOUSE 24 kDa 3.4 7.77- 7.31, 7.68, 8.32 26.7- 27.1, 25.7, 27.3
Isoform 1 of Gammaadducin ADDG_MOUSE 75 kDa 3 0.136- 0.145, 0.131, 0.132 0.404- 0.399, 0.413, 0.4
Potassium/sodium hyperpolarization activated cyclic nucleotide gated channel 1 HCN1_MOUSE 102 kDa 2.9 0.0986- 0.0924, 0.0999, 0.1035 0.285- 0.263, 0.278, 0.314
WD repeat containing protein 1 WDR1_MOUSE 66 kDa 2.6 0.212- 0.195, 0.225, 0.216 0.542- 0.431, 0.558, 0.637
Isoform 2 of Disks large homolog 1 DLG1_MOUSE 100 kDa 2.5 0.101- 0.099, 0.115, 0.089 0.253- 0.229, 0.261, 0.269
Isoform 2 of Putative tyrosine protein phosphatase auxilin AUXI_MOUSE 99 kDa 2.5 0.103- 0.089, 0.110, 0.11 0.256- 0.247, 0.273,0.248
Thioredoxin related transmembrane protein 2 D3Z2J6_MOUSE 30 kDa 2.4 0.376- 0.352, 0.4, 0.376 0.892- 0.886, 0.879, 0.911
Ras-related protein Rab2A RAB2A_MOUSE 24 kDa 2.4 0.939- 0.894, 1, 0.923 2.29- 2.16, 2.88, 1.83
Serine/threonine protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 2A5E_MOUSE 55 kDa 2.3 0.337- 0.265, 0.351, 0.395 0.789- 0.667, 0.8, 0.9
Isoform 2 of Chondroitin sulfate proteoglycan 5 CSPG5_MOUSE 57 kDa 2.2 0.182- 0.166, 0.190, 0.19 0.396- 0.382, 0.4, 0.406
Annexin A6 ANXA6_MOUSE 76 kDa 2.1 0.59- 0.46, 0.62, 0.69 1.23- 1.20, 1.37, 1.12
Isoform 3 of Neuronal cell adhesion molecule NRCAM_MOUSE 139 kDa 2.1 0.0969- 0.0917, 0.099, 0.1 0.203- 0.210, 0.179, 0.22
Isoform 3 of Cell adhesion molecule 2 CADM2_MOUSE 44 kDa 2.1 0.665- 0.659, 0.7, 0.636 1.4- 1.09, 1.6, 1.51
Vesicle-associated membrane protein 2 B0QZN5_MOUSE 18 kDa 2 2.34- 2.19, 2.86, 1.97 4.6- 3.9, 4.8, 5.1
Septin7 E9Q1G8_MOUSE 51 kDa 2 0.552- 0.592, 0.488, 0.576 1.12- 1.08, 1.2, 1.08