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. 2015 Jun 1;16(Suppl 9):S6. doi: 10.1186/1471-2105-16-S9-S6

Figure 4.

Figure 4

Analysis of inter and intra-loop interactions Average count of inter and intra-loop interactions from umbrella sampling simulations. Results are shown for both Apo and Holo forms, using both forward (Fwd) and backward (Bwd) protocols (see main text for definition). Watson-Crick and non-Watson-Crick pairings as well as intra and inter-loop stackings are shown as indicated.