Table 2.
Unigene assembly | |
---|---|
No. of transcripts in initial assembly | 486,622 |
No. of transcripts in filtered assembly | 232,702 |
No. of transcripts in Nr unigene set | 55,949 |
Max sequence length (bp) | 20,589 |
Average sequence length (bp) | 1,250 |
N50 length (bp) | 1,998 |
Functional annotation | |
Protein database | % of Nr unigenes |
NCBI Nr | 94.0 |
Swiss-Prot | 75.6 |
TAIR (A. thaliana) | 80.6 |
Tomato (S. lycopersicum) | 84.5 |
Potato (S. tuberosum L.) | 81.8 |