Table 3. Genes located inside or within 50,000 bp from start and end of the multi SNP clusters in the dog genome.

Cluster	Genes
1	PKHD1
2	none
3	SCEL, SLAIN1, EDNRB
4	RPL17, (OTX2-AS1
5	TBX20, HERPUD2, SEPT7, EEPD1, KIAA0895
6	CAPZA3, PLCZ1, PIK3C2G, RERGL, LMO3, MGST1, SLC15A5, DERA, STRAP, EPS8, PTPRO, RERG, PDE6H, ARHGDIB, ERP27, MGP, ART4, C27H12orf60, SMCO3, WBP11, H2AFJ, TRNAG-UCC, GUCY2C, PLBD1, ATF7IP, GRIN2B, EMP1, GSG1, KIAA1467, HEBP1, GPRC5D, GPRC5A, DDX47
7	KLRC1, KLRK1, KLRD1, GABARAPL1, TMEM52B, OLR1, CLEC7A, CLEC1B, CLEC12B, CLEC12A, KLRF2, CLEC2B, KLRF1, CD69, CLEC2D, KLRB1, KLRB1
8	QPCT, CDC42EP3, FAM82A1, CYP1B1, ATL2, HNRNPLL, GALM, SRSF7, GEMIN6, DHX57, MORN2, ARHGEF33, SOS1, CDKL4, MAP4K3, TMEM178A, THUMPD2, SLC8A1
9	OFD1
10	ZNF385D, TEAD2, SGOL1
11	COUP-TFII (NR2F2)

Cluster numbers refer to the numbering from Table 2.