Table 1. Statistics of WGS and assembly summary for nine P. ginseng accessions.
Cultivar names | WGS reads for cp assembly | Length (bp) of sequence (GenBank acc. No.) | |||
---|---|---|---|---|---|
Amounts (Mb) | Genome coverage (x) a | Cp coverage (x) a | Chloroplast | 45S nrDNA b | |
Chunpoong (ChP) | 505 | 0.2 | 64 | 156,248 (KM088019) | 11,091 (KM036295) |
Yunpoong (YP) | 1,010 | 0.3 | 97 | 156,355 (KM088020) | 11,091 (KM036296) |
Gumpoong (GU) | 505 | 0.2 | 80.00 | 156,356 (KM067388) | 11,067 (KM207667) |
Gopoong (GO) | 1,010 | 0.3 | 325.67 | 156,355 (KM067387) | 10,095 (KM207668) |
Sunpoong (SP) | 505 | 0.2 | 89.04 | 156,355 (KM067391) | 11,012 (KM207671) |
Sunone (SO) | 1,010 | 0.3 | 153.57 | 156,355 (KM067390) | 11,089 (KM207670) |
Sunun (SU) | 505 | 0.2 | 66.73 | 156,355 (KM067392) | 11,025 (KM207672) |
Sunhyang (SH) | 505 | 0.2 | 96.30 | 156,425 (KM067393) | 10,991 (KM207669) |
Cheongsun (CS) | 505 | 0.2 | 99.74 | 156,356 (KM067386) | 10,952 (KM207666) |
Hwangsook (HS) | 505 | 0.2 | 267.90 | 156,241 (KM067394) | 11,070 (KM207673) |
Jakyung (JK) | 340 | 0.1 | 91.19 | 156,355 (KM067389) | 10,964 (KM207674) |
a Coverage of genome and cp indicate the total WGS read depth for the complete genome and chloroplast genome, respectively.
b 45S nrDNA length: nearly 1 unit length included full 45S transcription sequence and partial IGS sequence.