Table 2. Length distribution and totals for cs-isomiRNAs and ls-isomiRNAs.
cs-isomiRNA | ls-isomiRNAs | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
RPM | isomiRNA number | Average (RPM/ isomiR) | RPM | isomiRNA # | Average (RPM/ isomiR) | |||||
All-isomiRNAs | ||||||||||
len = 17 | 0.0 | 0.0% | 0 | 0.0% | 0.0 | 0.0% | 0 | 0.0% | ||
len = 18 | 1,921.7 | 2.4% | 145 | 9.8% | 13.3 | 7.0 | 0.9% | 14 | 2.5% | 0.5 |
len = 19 | 9,202.9 | 11.7% | 209 | 14.1% | 44.0 | 40.8 | 5.3% | 30 | 5.4% | 1.4 |
len = 20 | 7,630.9 | 9.7% | 16.6% | 31.0 | 118.6 | 15.4% | 43 | 7.8% | 2.8 | |
len = 21 | 18,093.8 | 23.0% | 297 | 20.1% | 60.9 | 163.5 | 21.2% | 106 | 19.2% | 1.5 |
len = 22 | 40,163.2 | 51.0% | 202 | 13.6% | 198.8 | 153.9 | 19.9% | 80 | 14.5% | 1.9 |
len = 23 | 1,176.2 | 1.5% | 150 | 10.1% | 7.8 | 73.7 | 9.5% | 95 | 17.2% | 0.8 |
len = 24 | 387.3 | 0.5% | 184 | 12.4% | 2.1 | 198.4 | 25.7% | 157 | 28.4% | 1.3 |
len = 25 | 114.0 | 0.1% | 42 | 2.8% | 2.7 | 13.4 | 1.7% | 22 | 4.0% | 0.6 |
len = 26 | 2.1 | 0.0% | 5 | 0.3% | 0.4 | 2.5 | 0.3% | 6 | 1.1% | 0.4 |
len = 27 | 0.0 | 0.0% | 0 | 0.0% | 0.0 | 0.0% | 0 | 0.0% | ||
SUM | 78,692.1 | 100% | 1,480 | 100% | 53.2 | 771.8 | 100% | 553 | 100% | 1.4 |
Expression > = 10 RPM—isomiRNAs | ||||||||||
len = 17 | 0.0 | 0.0% | 0 | 0.0% | 0.0 | 0.0% | 0 | 0.0% | ||
len = 18 | 1,721.2 | 2.2% | 13 | 8.3% | 132.4 | 0.0 | 0.0% | 0 | 0.0% | |
len = 19 | 8,989.8 | 11.7% | 33 | 21.2% | 272.4 | 16.8 | 5.3% | 1 | 8.3% | 16.8 |
len = 20 | 7,329.4 | 9.5% | 41 | 26.3% | 178.8 | 84.9 | 26.9% | 2 | 16.7% | 42.5 |
len = 21 | 17,734.0 | 23.0% | 30 | 19.2% | 591.1 | 76.5 | 24.3% | 2 | 16.7% | 38.3 |
len = 22 | 39,901.4 | 51.8% | 28 | 17.9% | 1425.1 | 84.3 | 26.7% | 4 | 33.3% | 21.1 |
len = 23 | 1,043.7 | 1.4% | 3 | 1.9% | 347.9 | 0.0 | 0.0% | 0 | 0.0% | |
len = 24 | 207.1 | 0.3% | 5 | 3.2% | 41.4 | 52.9 | 16.8% | 3 | 25.0% | 17.6 |
len = 25 | 87.0 | 0.1% | 3 | 1.9% | 29.0 | 0.0 | 0.0% | 0 | 0.0% | |
len = 26 | 0.0 | 0.0% | 0 | 0.0% | 0.0 | 0.0% | 0 | 0.0% | ||
len = 27 | 0.0 | 0.0% | 0 | 0.0% | 0.0 | 0.0% | 0 | 0.0% | ||
SUM | 77,013.6 | 100% | 156 | 100% | 493.7 | 315.4 | 100% | 12 | 100% | 26.3 |
Ratio (>10/all) | 97.9% | 10.5% | 9.3 | 40.9% | 2.2% | 18.8 |