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. 2015 Feb 21;16:55. doi: 10.1186/s12859-015-0472-9

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© Bravo et al.; licensee BioMed Central. 2015

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Dependency graph representation of a gene-disease association. a) Dependency graph representation of the sentence. Solid lines represent the shortest path between the two candidates. The token “associated” is the Least Common Subsumer (LCS) node of both candidates. b) Subgraph representing the shortest path between EHD3 and MDD, where syntactic dependencies are represented as edges and tokens as nodes. c) The e-walk and v-walk features for the node “association” and the syntactic (token, stem, lemma, POS) and semantic features (role) considered in the K _DEP kernel.