Table 1.
A list of The Cancer Genome Atlas RNAseq data sets
| Tumor type | Tumor* | Normal |
|---|---|---|
| Bladder urothelial carcinoma | 121 | 16 |
| Breast cancer | 1,019 | 110 |
| Glioblastoma multiforme | 158 | - |
| Head and neck squamous cell carcinoma | 300 | 37 |
| Clear cell renal cell carcinoma | 474 | 71 |
| Acute myeloid leukemia | 171 | - |
| Low grade glioma | 266 | - |
| Lung adenocarcinoma | 487 | 57 |
| Lung squamous cell carcinoma | 220 | 17 |
| Ovarian serous cystadenocarcinoma | 400 | - |
| Prostate adenocarcinoma | 178 | - |
| Skin cutaneous melanoma | 78 | - |
| Thyroid carcinoma | 494 | 56 |
| Total | 4,366 | 364 |
*
Primary tumor samples with both RNAseq and Affymetrix SNP6 array data were analyzed.