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. 2015 Jun 16;6:403. doi: 10.3389/fpls.2015.00403

Table 1.

Parameters, formulae and their description using data extracted from chlorophyll (Chl) a fluorescence (OJIP) transient emitted by dark-adapted photosynthetic samples (Yusuf et al., 2010).

Fluorescence parameters Description
EXTRACTED PARAMETERS
Ft Fluorescence at time t after onset of actinic illumination
Fo Minimum fluorescence, when all PSII reaction centers (RCs) are open
Fm Maximum fluorescence, when all PSII RCs are closed
F50μ 4s, F100μ 4s, F300 4μ 4s Fluorescence intensity at 50, 100, and 300 μs, respectively
FJ Fluorescence intensity at the J-step (2 ms)
FI Fluorescence intensity at the I-step (30 ms)
Area Total complementary area between fluorescence induction cure and F = Fm
TECHNICAL FLUORESCENCE PARAMETERS
Vt4 = (Ft − Fo)/(Fm − Fo) Relative variable fluorescence at time t
VJ4 = (F2ms − Fo)/(Fm − Fo) Relative variable fluorescence at the J-step (2 ms)
VI4 = (F30ms − Fo)/(Fm − Fo) Relative variable fluorescence at the I-step (30 ms)
Mo4 = 4 (F300 μ4s – Fo)/(Fm – Fo) Approximated initial slope (in ms−1) of the fluorescence transient V = f (t)
QUANTUM YIELDS AND EFFICIENCIES/PROBABILITIES
φPo4 = TRO/ABS = 1–(FO/Fm) Maximum quantum yield for primary photochemistry
ψEo4 = ETO/TRO4 = 1–VJ Effciency/probability with which a PSII trapped electron is transferred from QA to QB
δRo = 4REO/ETO = (1–VI)/(1–VJ) Efficiency/probability with which an electron from QB is transfered uuntil PSI acceptors
SPECIFIC ENERGY FLUXES (PER ACTIVE PSII REACTION CENTER)
ABS/RC = Mo(1/VJ)(1/φPo) Absorbed photon flux per RC
TRo/RC = Mo(1/VJ) Trapped excitation flux (leading to QA reduction) per RC
ETo/RC = Mo(1/VJ) ψEo Electron transport flux (further than QA) per RC
REo/RC = Mo(1/VJ) ψEo 4δ4Ro Electron flux reducing end electron acceptors at the PSI acceptor side, per RC