FIG 4.

Comparison of mRNA and ribosome footprint reads in expanded regions of the VACV genome. (A) Transcription and ribosome footprint maps of the HindIII D region of the VACV genome at 2, 4, and 8 h of infection. The annotated ORFs D1 to D13 in this region are displayed, with green and red indicating early and postreplicative expression, respectively. (B and C) Transcripts and ribosome footprints corresponding to the I3L and D9R ORFs at 2 h of infection. Note that L and R following the ORF number indicate leftwards and rightwards transcription, respectively.