Table 2. Specific GO terms enriched between XinFLM and XinWX at three time points.

Developmental stage		GO annotation	Functional Categories	FDR
-1 DPA	up in XinFLM	GO:0006529	asparagine biosynthetic process	8.56E-10
		GO:0009743	response to carbohydrate stimulus	4.97E-04
		GO:0009646	response to absence of light	1.20E-04
		GO:0016762	xyloglucan:xyloglucosyl transferase activity	4.07E-08
		GO:0006541	glutamine metabolic process	0.011596
	up in XinWX	GO:0055114	oxidation-reduction process	2.27E-11
		GO:0006006	glucose metabolic process	2.04E-11
		GO:0006732	coenzyme metabolic process	0.00683
		GO:0055085	transmembrane transport	0.0486
		GO:0016052	carbohydrate catabolic process	3.13E-10
		GO:0046506	sulfolipid biosynthetic process	0.00138
0 DPA	up in XinFLM	GO:0010200	response to chitin	0.000103
		GO:0006869	lipid transport	2.44E-04
		GO:0010876	lipid localization	2.44E-04
		GO:0071702	organic substance transport	0.00701
		GO:0009743	response to carbohydrate stimulus	0.0255
		GO:0009700	indole phytoalexin biosynthetic process	0.04749
	up in XinWX	GO:0009765	photosynthesis, light harvesting	0.02905
		GO:0060862	negative regulation of floral organ abscission	0.03751
		GO:0019310	inositol catabolic process	0.02905
		GO:0018298	protein-chromophore linkage	0.01193
1 DPA	up in XinFLM	GO:0006869	lipid transport	0.00000024
		GO:0010876	lipid localization	2.40E-07
		GO:0071702	organic substance transport	0.00389
		GO:0050625	2-hydroxy-1,4-benzoquinone reductase activity	0.004528246
		GO:0042335	tcuticle development	0.04312
	up in XinWX	GO:0009642	response to light intensity	9.30E-05
		GO:0046423	allene-oxide cyclase activity	2.12E-04
		GO:0006529	asparagine biosynthetic process	0.00237
		GO:0009939	positive regulation of gibberellic acid mediated signaling pathway	0.00818
		GO:0055085	transmembrane transport	0.01671

NA, no result

FDR, false discovery rate.