Table 2.
Sample name | Raw reads | Clean reads | Clean bases | Error rate (%) | Q20 (%) | Q30 (%) | GC content (%) | Total mapped |
---|---|---|---|---|---|---|---|---|
NT_1 | 11,101,544 | 10,678,262 | 1.07G | 0.06 | 95.17 | 86.58 | 64.04 | 9,074,411 (84.98%) |
NT_2 | 11,845,613 | 11,378,840 | 1.14G | 0.06 | 94.9 | 85.88 | 63.6 | 8,380,392 (73.65%) |
HT_1 | 12,369,188 | 11,878,032 | 1.19G | 0.06 | 94.94 | 86.05 | 64.38 | 9,518,267 (80.13%) |
HT_2 | 12,595,064 | 12,075,828 | 1.21G | 0.06 | 94.81 | 85.84 | 64.58 | 9,402,614 (77.86%) |
CS_1 | 12,098,964 | 11,676,535 | 1.17G | 0.06 | 95.21 | 86.49 | 63.97 | 8,797,628 (75.34%) |
CS_2 | 11,856,911 | 11,420,971 | 1.14G | 0.06 | 94.97 | 85.48 | 63.54 | 8,342,733 (73.05%) |
FS_8_1 | 12,320,559 | 11,705,396 | 1.17G | 0.06 | 92.15 | 80.32 | 63.83 | 8,788,660 (75.08%) |
FS_8_2 | 12,588,529 | 12,077,780 | 1.21G | 0.06 | 94.8 | 85.79 | 64.53 | 9,605,511 (79.53%) |