. Author manuscript; available in PMC: 2016 Jun 1.

Published in final edited form as: Mol Cancer Res. 2015 Mar 12;13(6):993–1002. doi: 10.1158/1541-7786.MCR-14-0689

Table 1.

Variant filtration and annotation in the four InvTCC tumors. Filtering polymorphic positions and low-quality variants narrowed candidate somatic mutations, and functional annotation highlighted variants for further analysis.

	^a SCOT1	SCOT2	WHWT	SHLT
Raw Variants	26,190	25,009	25,968	23,625
Polymorphism Filter	1,105	750	989	874
Quality Filter	912	538	759	704
Synonymous	233	136	211	204
Missense	338	144	244	205
Stop Gained	5	5	2	3

SCOT1 and SCOT2 = Scottish Terrier, WHWT = West Highland White Terrier, SHLT = Shetland Sheepdog.