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. 2015 Jun 17;10(6):e0128452. doi: 10.1371/journal.pone.0128452

Table 2. Genome-wide significant loci and corresponding trans-ethnic results for sRAGE levels in whites and blacks.

SNP a Gene Chr:base pair position Whites Blacks
A1 b /A2 A1 frequency Β c P D’ r2 d A1 frequency β P D’e r2 e
rs2854050 NOTCH4 6:32185605 A/G 0.06 -0.50 2.13e-11 NA NA 0.03 -0.21 0.20301 1.0 0.003
rs2071288 AGER 6:32149260 T/C 0.005 -0.43 0.10 1.0 0.0 0.10 -0.56 2.22e-08 NA NA
rs2070600 AGER 6:32151443 T/C 0.04 -0.67 7.26e-16 0.92 0.84 0.01 -0.63 0.017903 1.0 0.001

aFrom dbSNP build 37

bA1 is the minor allele in whites

cMean change in ln(sRAGE) for Allele 1 vs. Allele 2

dWith rs2854050 (index SNP from GWAS in whites)

eWith rs2071288 (index SNP from GWAS in blacks)