Table 2.
Predominant bacterial genera (expressed as percentage of sequences) in faeces of domestic cats with (n 3) and without (n 9) symptoms of infection
| Phylum | Family | Genus | Salmonella negative | Salmonella positive | sem | P value |
|---|---|---|---|---|---|---|
| Actinobacteria | Coriobacteriaceae | Collinsella | 5·1 | 3·5 | 1·6 | 0·49 |
| Slackia | 0·2 | 0·1 | 0·1 | 0·65 | ||
| Firmicutes | Clostridiaceae | Clostridium | 15·8 | 22·3 | 3·1 | 0·18 |
| Enterococcaeae | Enterococcus | 1·4 | 1·6 | 0·7 | 0·74 | |
| Erysipelotrichaceae | Allobaculum | 1·2 | 1·4 | 0·8 | 0·83 | |
| Unidentified genera | 0·7 | 0·2 | 0·3 | 0·19 | ||
| Eubacteriaceae | Eubacterium | 4·2 | 3·1 | 1·7 | 0·38 | |
| Lachnospiraceae | Blautia | 10·1 | 12 | 2·8 | 0·65 | |
| Coprococcus | 0·4 | 5·6 | 1·4 | < 0·01 | ||
| Moryella | 0·6 | 0·1 | 0·3 | 0·27 | ||
| Psuedobutyrivibrio | 3·6 | 4·3 | 0·9 | 0·50 | ||
| Roseburia | 1·0 | 0·7 | 0·5 | 0·67 | ||
| Unidentified genera | 16·6 | 12·3 | 2·4 | 0·22 | ||
| Oscillospiraceae | Oscillibacter | 0·4 | 0·1 | 0·1 | 0·06 | |
| Peptococcaeae | Peptococcus | 10·3 | 10·9 | 2·5 | 0·87 | |
| Peptostreptococcaeae | Peptostreptococcus | 1·6 | 0·0 | 1·4 | 0·39 | |
| Unidentified genera | 0·3 | 0·4 | 0·1 | 0·35 | ||
| Ruminococcaceae | Anaerotruncus | 2·3 | 1·4 | 0·4 | 0·09 | |
| Ruminococcus | 4·5 | 4·8 | 1·6 | 0·89 | ||
| Unidentified genera | 2·5 | 1·1 | 0·8 | 0·20 | ||
| Fusobacteria | Fusobacteriaceae | Fusobacterium | 8·6 | 7·4 | 2·1 | 0·71 |
| Proteobacteria | Campylobacteraceae | Campylobacter | 1·6 | 0·3 | 1·7 | 0·61 |
| Enterobacteriaceae | Escherichia Shigella | 0·3 | 1·1 | 0·3 | 0·03 | |
| Shigella | 1·8 | 3·5 | 1·3 | 0·41 | ||
| Succinivibrionaceae | Anaerobiospirillum | 0·8 | 1·3 | 0·8 | 0·73 | |
| Sutterellaceae | Sutterella | 1·1 | 0·7 | 0·5 | 0·58 |