TABLE 4.
Amino acid substitutions in critical positions of gyrA and parC QRDRs in selected S. suis isolatesa
Origin/strain |
gyrA |
parC |
No. of isolates | MIC/MIC range (μg/ml)b |
||||
---|---|---|---|---|---|---|---|---|
Ser81c | Glu85 | Ser79 | Asp83 | NAL | ENR | CIP | ||
Diseased pig isolates | Ile | —d | Tyr | — | 3 | 128–128 | 8–16 | 16–32 |
Lys | Asp | Phe | — | 2 | 64–256 | 4–8 | 8–8 | |
Lys | Asp | Leu | — | 1 | 256 | 16 | 16 | |
Lys | Asp | Tyr | — | 1 | 256 | 16 | 16 | |
Phe | — | Tyr | — | 1 | 128 | 16 | 32 | |
Phe | — | Phe | — | 1 | 128 | 16 | 32 | |
Ala | — | Tyr | — | 1 | 256 | 4 | 16 | |
— | Lys | Phe | — | 1 | 256 | 16 | 32 | |
— | — | Tyr | — | 1 | 256 | 2 | 4 | |
Healthy pig isolates | Ile | — | Tyr | Val | 1 | 128 | 64 | 64 |
Ile | — | Phe | — | 5 | 128–512 | 16–64 | 32–64 | |
Ile | — | Tyr | — | 3 | 256–512 | 8–8 | 16–32 | |
Lys | Asp | Tyr | — | 1 | 512 | 8 | 16 | |
Phe | — | Phe | — | 11 | 128–512 | 8–32 | 16–64 | |
Phe | — | Tyr | — | 1 | 256 | 16 | 64 | |
Tyr | — | Phe | — | 9 | 128–512 | 8–32 | 16–64 | |
Tyr | — | Tyr | — | 10 | 128–256 | 8–32 | 16–64 | |
Tyr | — | — | Tyr | 1 | 128 | 4 | 16 | |
Tyr | — | — | — | 1 | 256 | 2 | 4 |
QRDR, quinolone resistance determining region.
NAL, nalidixic acid; ENR, enrofloxacin; CIP, ciprofloxacin.
The QRDR DNA sequences of gyrA and parC were compared with the QRDR of gyrA (GenBank: DQ832724) and parC (GenBank: DQ832742) of S. suis type strain ATCC 43765.
—, identical to that of reference strain S. suis ATCC 43765.