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. 2015 Apr 29;89(14):7133–7146. doi: 10.1128/JVI.00437-15

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FIG 5 — Intraclade recombination analysis of clade 2. (A) Phylogenetic network based on the complete genomes of strains from clade 2, excluding sites that were ambiguous in the GenBank sequences for vOka and pOka. (B) Recombinant strains among the data set analyzed in panel A suggested by the RDP program and statistical support for yielded by each method for respective recombination event. (C) Phylogenetic network based on all strains in clade 2 except for pOka and vOka. (D) Recombinant strains among the data set analyzed in panel C suggested by the RDP program and statistical support yielded by each method for respective recombination event.