Table 1.
Summary of reads obtained by RNA-Seq analysis
For each analysis, two biological replicates were processed (+N sample: libraries 1 and 2; –N sample: libraries 3 and 4).
| Result | Libraries | |||||||
|---|---|---|---|---|---|---|---|---|
| 1 | 2 | 3 | 4 | |||||
| No. of total reads | 38787677 | 100% | 65608508 | 100% | 26009381 | 100% | 28335261 | 100% |
| No. of mapped reads | 33537854 | 86% | 57435252 | 88% | 22449519 | 86% | 23561167 | 83% |
| Unique | 12117740 | 31% | 20536079 | 31% | 8177365 | 31% | 8386919 | 30% |
| Multimatch | 21420114 | 55% | 36899173 | 56% | 14272154 | 55% | 15174248 | 54% |
| No. of reads not mapped | 5249823 | 14% | 8173256 | 12% | 3559862 | 14% | 4774094 | 17% |