TABLE 2.

MiSeq sequencing statistics of HSV-2 isolates

Viral isolate	No. of reads	No. of reads mapped to reference	Avg mapped read length (bp)	Avg coverage	Gapped genome length (bp)
333	475,138	99,906	217	140×	154,764
1192	321,344	109,545	216	152×	154,668
CtSF	452,640	144,919	218	203×	154,709
CtSF-R	494,046	140,481	216	190×	154,705
COH 3818	416,512	128,195	219	181×	154,739
GSC-56	407,234	110,159	219	156×	154,703