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. Author manuscript; available in PMC: 2015 Aug 1.
Published in final edited form as: Biophys Chem. 2014 Jun 24;192:41–48. doi: 10.1016/j.bpc.2014.06.004

Fig. 5.

Fig. 5

Transition matrix for wild type FKBP12 characterizing the trans-to-gauche χ1 rotamer transitions for the sidechains of Trp 59 and Glu 60 and the hydrogen bonding status between Glu 60 O and Ala 64 HN (> or < 2.5 Å). The 1.14 μs of molecular simulation was sampled at 5 ps intervals. A small set of transitions of the χ1 rotamers with residence times less than 15 ps were disregarded. These generally corresponded to conformations that move only slightly beyond the torsional barrier maximum at 240° separating the trans and gauche rotamers. The 59g− denotes Trp 59 sidechains with a gauche χ1 rotamer and a Nε1-HNε1 angle (relative to the initial frame) < 50°, while 59t denotes the trans χ1 rotamer with a Nε1-HNε1 angle > 50°. The population average for each state is listed along the bottom.