Table 1.
Sample of the Genes under Positive Selection in Human and Mouse and Their Parameter Estimates.
| Gene Name | Positively Selected Sites | P-Value of Positively Selected Sites |
|---|---|---|
| Genes under positive selection in human | ||
| CARD6 | 264, 346, 382, 750, 767, 805, 818, 903, 916, 937, 998, 1010, and 1031 | 13 > 0.50, 0 > 0.95, 0 > 0.99 |
| IRF3 | 119, 129, and 333 | 3 > 0.50, 0 > 0.95, 0 > 0.99 |
| Genes under positive selection in mouse | ||
| Adipoq | 25, 27, 29, and 82 | 4 > 0.50, 0 > 0.95, 0 > 0.99 |
| Atg9a | 634 and 662* | 2 > 0.50, 1 > 0.95, 0 > 0.99 |
| C1inh | 332*, 365, 468, 479 | 4 > 0.50, 1 > 0.95, 0 > 0.99 |
| C1ra | 468, 520, 574, 631, 633, and 634* | 6 > 0.50, 1 > 0.95, 0 > 0.99 |
| C6 | 220, 233, 319, 353, 378, 408, 419, 430, 554, 655, 681, 703, 792, and 930 | 14 > 0.50, 0 > 0.95, 0 > 0.99 |
| C8b | 242*, 263, 278, 383*, and 488 | 5 > 0.50, 2 > 0.95, 0 > 0.99 |
| Card6 | 394, 501, and 702 | 3 > 0.50, 0 > 0.95, 0 > 0.99 |
| Cd200 | 129 and 177 | 2 > 0.50, 0 > 0.95, 0 > 0.99 |
| Cd63 | 31, 118, 143, 184*, 194, and 203 | 6 > 0.50, 1 > 0.95, 0 > 0.99 |
| Cfh | 209, 243, 474, 767, 1005, 1068, 1074, 1104, 1181, and 1227 | 10 > 0.50, 0 > 0.95, 0 > 0.99 |
| Ecsit | 10, 12, 75, 82, 176, 325, 330**, 348, and 371 | 9 > 0.50, 1 > 0.95, 1 > 0.99 |
| Eif2ak2 | 136, 155, 181, 182*, 344, and 345 | 6 > 0.50, 1 > 0.95, 0 > 0.99 |
| F12 | 45, 65, 166, 243**, and 454 | 5 > 0.50, 1 > 0.95, 1 > 0.99 |
| Grn | 18, 101, 198, 303, 375*, 382, 411, 549, and 597 | 9 > 0.50, 1 > 0.95, 0 > 0.99 |
| Ifit2 | 191, 402, and 420 | 3 > 0.50, 0 > 0.95, 0 > 0.99 |
| Il1rapl2 | 566, 628, and 666* | 3 > 0.50, 1 > 0.95, 0 > 0.99 |
| Il2rb | 4, 13, 31, 55, 174, 202, 347*, 402, 418, 491, 496, and 516 | 12 > 0.50, 1 > 0.95, 0 > 0.99 |
| Il4ra | 47, 67, 308, 330, and 626 | 5 > 0.50, 0 > 0.95, 0 > 0.99 |
| Irf5 | 232, 259, and 262 | 3 > 0.50, 0 > 0.95, 0 > 0.99 |
| Lbp | 24, 40 and 329 | 3 > 0.50, 0 > 0.95, 0 > 0.99 |
| Lgals3 | 22, 92, 94, and 260 | 4 > 0.50, 0 > 0.95, 0 > 0.99 |
| Lrrfip1 | 328, 449, 468, 480, and 571 | 5 > 0.50, 0 > 0.95, 0 > 0.99 |
| Ltb4r1 | 53, 101, and 175 | 3 > 0.50, 0 > 0.95, 0 > 0.99 |
| Nlrp14 | 77, 79*, 186, 212, 219, 254, 257, 263, 272, 281, 284, 291, 294, 315, 319, 333, 358, 393, 415, 424, 453, 465, 530, 549, 552, 553, 584, 613, 657, 679, 684, 685, 687, 696, 782, 810, 814, 829, 846, 848, 902, 908, 912, 931, 953, 956, 958, 978, 982, 984, and 986 | 51 > 0.50, 0 > 0.95, 0 > 0.99 |
| Nlrp6 | 22, 25, 72, 77, 80, 81, 85, 96, 101, 113, 114, 190, 192, 251, 260**, 329, 344, 479, 488, 515, 553, 571, 628, 657, 727, 737, 739, 744, 771, 775*, 776, 793, 807, 865, 877, and 880 | 36 > 0.50, 2 > 0.95, 1 > 0.99 |
| Oas2 | 55, 56, 139, 171, 199, 211, 221, 298, 481, 549, and 711 | 11 > 0.50, 0 > 0.95, 0 > 0.99 |
| Plcg2 | 461 and 594* | 2 > 0.50, 1 > 0.95, 0 > 0.99 |
| Ptpn2 | 166, 206, 319, 321, and 329 | 5 > 0.50, 0 > 0.95, 0 > 0.99 |
| Rnf31 | 203, 431, and 1025 | 3 > 0.50, 0 > 0.95, 0 > 0.99 |
| Sirt1 | 107, 537, 698, and 701 | 4 > 0.50, 0 > 0.95, 0 > 0.99 |
| Snap23 | 109, 133, and 197 | 3 > 0.50, 0 > 0.95, 0 > 0.99 |
| Stat2 | 21, 130, 149, 157, 195, 205, 218, 354, 623*, 869, 871, 874, 876, and 877 | 14 > 0.50, 1 > 0.95, 0 > 0.99 |
| Tcf4 | 139 | 1 > 0.50, 0 > 0.95, 0 > 0.99 |
| Tlr3 | 266, 297, and 603 | 3 > 0.50, 0 > 0.95, 0 > 0.99 |
| Trif | 18, 327, 338, 388, 482, 556, and 711 | 8 > 0.50, 0 > 0.95, 0 > 0.99 |
Note.—For each gene the positively selected sites are displayed and the associated posterior probability is indicated as follows: * >0.95, ** >0.99 and no asterisk implies 0.50 < PP < 0.95.