Table 1.
Strain and primers | Description | Source |
---|---|---|
M. colombiense (CECT 3035) | Sequence genome strain | Clinical isolate |
M. colombiense 19B and 57B | Clinical isolates | Clinical isolate |
M. smegmatis mc2155 | Reference strain | [28] |
M. avium 104 | Reference strain | [27] |
P. aeruginosa ATCC27853 | Reference strain | [29] |
| ||
Primers | Sequence (5′-3′) | |
| ||
pstA dir | ACAGGGCACGAGGAATTCTA | This study |
pstA rev | TAGTCCTCGGAGGCTTCGTA | This study |
gftA dir | ATGTGTGCTGGCCAGTTATG | This study |
gftA rev | GGAAGAACGACGTCCAGAAG | This study |
rtfA dir | GACTTTTGGAGCGACGAGTT | This study |
rtfA rev | GCCAAATCCTGGTAAAGCTG | This study |
mtfB dir | GGACACCGAGCACTACGAG | This study |
mtfB rev | TCATACAGATCGCCATCCAG | This study |
mtfC dir | ACAAGGCGGATAAAGGGATT | This study |
mtfC rev | CTCATACAGATCGCCATCCA | This study |
mtfD dir | TACCTGCTCGACACCTTCG | This study |
mtfD rev | TCGACCTGCTCGAGTGTCT | This study |
tmtpC dir | TTCATTCGGGATACCAGGAG | This study |
tmtpC rev | TTGATCCTGACCCGAAGTTT | This study |
tmtpA dir | CTCTCGGCTTTGACGACAC | This study |
tmtpA rev | ATGGCCGACATCAGCTACTT | This study |
tmtpB dir | GAGTGCCCTTGAGTGATTCC | This study |
tmtpB rev | CCTCCAAGAATGACGATTCC | This study |
16 sRNA dir | GAGATAGGCGTTCCCTTGTG | This study |
16 sRNA rev | CTGGACATAAGGGGCATGAT | This study |