Table 3.

Twelve differentially expressed genes identified in hormone-treated shoots undergoing female bud initiation.

Comparisons	MgPUTs ID	Differential expression	Arabidopsis or Oryza match	Annotation
CK3 vs. TR3	isotig13796	Down	ELF3	Protein EARLY FLOWERING 3
	isotig23456	Down	FPA	Flowering time control protein FPA
	isotig10554	Down	Os11g0472000	Zinc finger CCCH domain-containing protein 63
	isotig12601	Down	At2g05160	Zinc finger CCCH domain-containing protein 18
	isotig12602	Down	At2g05160	Zinc finger CCCH domain-containing protein 18
	isotig14067	Down	Os04g0438700	Zinc finger CCCH domain-containing protein 28
	isotig78340	Up	LUG	Transcriptional corepressor LEUNIG
CK4 vs. TR4	isotig14235	Up	FCA	Flowering time control protein FCA
	isotig14236	Up	FCA	Flowering time control protein FCA
	isotig08983	Up	Os07g0682400	Zinc finger CCCH domain-containing protein 53
	isotig14067	Up	Os04g0438700	Zinc finger CCCH domain-containing protein 28
	isotig23877	Up	Os05g0195200	Zinc finger CCCH domain-containing protein 35
	isotig26834	Up	Os04g0665700	Zinc finger CCCH domain-containing protein 31