Table 2. IS6100 elements in the studied genomes.
Confirmed | Putative | Total | |
---|---|---|---|
LL01 | 12 | 2 | 14 |
LL02 | 17 | 2 | 19 |
LL03 | 24 | 0 | 24 |
B90A | 0 | 20 | 20 |
HDIP04 | 4 | 9 | 13 |
RL-3 | 16 | 7 | 26 |
P25 | 23 | 2 | 25 |
IP26 | 16 | 10 | 26 |
UT26 | 14 | NAa | 14 |
MM-1 | 14 | NAa | 14 |
RW-1 | 1 | NAa | 1 |
SYK-6 | 0 | NAa | 0 |
DSM12444 | 0 | NAa | 0 |
Number of confirmed and predicted IS6100 elements in the 13 genomes studied in this article. Confirmed elements were identified by a match to the IS6100 transposase and putative elements were predicted from the presence of two IS6100 terminal inverted repeat sequences across contig boundaries. In completed genomes, the inverted repeat sequence is only found associated with IS6100 elements. NA, not available.
Complete genome, no contig boundaries to assess putative IS6100 elements.