. Author manuscript; available in PMC: 2015 Jun 25.

Published in final edited form as: Funct Integr Genomics. 2012 Feb 18;12(2):357–365. doi: 10.1007/s10142-012-0266-3

Table 3.

Genes in selected Gene Ontology categories of the biological processes significantly enriched with differentially expressed genes in black bear bone

GO category	Gene name	Gene symbol	P value	Fold change (log₂FC)
Skeletal development (GO:0001501)	Decorin	Dcn	0.008	0.955
	Fibronectin 1	Fn1	0.027	1.192
	Homeobox A10	Hoxa10	0.008	0.831
	Insulin-like growth factor 1 receptor	Igf1r	0.005	0.515
	KIAA1217	Kiaa1217	0.029	1.083
	Kruppel-like factor 10	Klf10	0.042	0.746
	Mitogen-activated protein kinase 8	Mapk8	0.006	0.837
	Myocyte enhancer factor 2C	Mef2c	0.013	1.055
	Paired related homeobox 1	Prrx1	<0.001	1.488
	Retinol binding protein 4, plasma	Rbp4	0.022	0.898
	Schwannomin interacting protein 1	Schip1	0.025	0.769
	SRY (sex determining region Y)-box 9	Sox9	0.010	0.568
	Yes-associated protein 1	Yap1	0.011	0.598
	Zinc finger E-box binding homeobox 1	Zeb1	<0.001	0.841
Cartilage development (GO:0051216)	Decorin	Dcn	0.008	0.955
	Myocyte enhancer factor 2 C	Mef2c	0.013	1.055
	Paired related homeobox 1	Prrx1	<0.001	1.488
	SRY (sex determining region Y)-box 9	Sox9	0.010	0.568
	Yes-associated protein 1	Yap1	0.011	0.598
	Zinc finger E-box binding homeobox 1	Zeb1	<0.001	0.841
Ossification (GO:0001503)	Fibronectin 1	Fn1	0.027	1.192
	Insulin-like growth factor 1 receptor	Igf1r	0.005	0.515
	Kruppel-like factor 10	Klf10	0.042	0.746
	Mitogen-activated protein kinase 8	Mapk8	0.006	0.837
	Myocyte enhancer factor 2C	Mef2c	0.013	1.055
	SRY (sex determining region Y)-box 9	Sox9	0.010	0.568