Table 1. Sequencing and mapping details of the samples.
Sample | Reads Processed | Aligned Reads | Unaligned Reads | Aligned (%) |
---|---|---|---|---|
LowControl1 | 15,840,740 | 12,242,921 | 3,597,819 | 77.29 |
MedControl1 | 12,049,016 | 9,408,739 | 2,640,277 | 78.09 |
HighControl1 | 17,685,076 | 11,692,413 | 5,992,663 | 66.11 |
LowControl2 | 7,788,797 | 6,213,214 | 1,575,583 | 79.77 |
MedControl2 | 7,406,875 | 5,497,846 | 1,909,029 | 74.23 |
HighControl2 | 18,880,981 | 12,546,980 | 6,334,001 | 66.45 |
LowVac1 | 7,475,829 | 6,256,266 | 1,219,563 | 83.69 |
MedVac1 | 7,389,194 | 5,849,164 | 1,540,030 | 79.16 |
HighVac1 | 9,922,376 | 6,909,168 | 3,013,208 | 69.63 |
LowVac2 | 8,402,205 | 6,992,132 | 1,410,073 | 83.22 |
MedVac2 | 6,437,102 | 5,335,687 | 1,101,415 | 82.89 |
HighVac2 | 7,383,856 | 5,066,831 | 2,317,025 | 68.62 |