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. 2015 Jun 26;5:11596. doi: 10.1038/srep11596

Table 1. Clinical isolates of Staphylococcusstrains used in the study.

Strain type Strain ID eGenomics spa repeat motiff Phenotypic properties eGenomics spatype Ridom spatype Source
Methicillin-resistant S. aureus (MRSA) USA100 TJMBMDMGMK Resistant to ciprofloxacin, clindamycin, erythromycin 2 t002 United States (Ohio)
  USA200 WGKAKAOMQQQ Resistant to clindamycin, methicillin erythromycin, gentamicin, 16 t018 United States (North Carolina)
  USA300 YHGFMBQBLO Resistant to erythromycin, methicillin, tetracycline 2 t008 United States (Mississippi)
  USA400 Resistant to methicillin, tetracycline United States (North Dakota)
  USA500 YHGCMBQBLO Resistant to ciprofloxacin, clindamycin, erythromycin, gentamicin, methicillin, tetracycline, trimethoprim 7 t064 United States (Connecticut)
  USA700 UJGFMGGM Resistant to erythromycin, methicillin 49 t126 United States (Louisiana)
  USA800 TJMBMDMGGMK Resistant to methicillin 29 t088 United States (Washington)
  USA1000 ZDGDGDEB Resistant to erythromycin, methicillin t316 United States (Vermont)
  USA1100 Resistant to methicillin United States (Alaska)
  ATCC 43300 Resistant to methicillin United States (Kansas)
  ATCC BAA–44 Multidrug–resistant strain Lisbon, Portugal
Linezolid-resistant S. aureus NRS119 (Linr) YHGCMBQBLO Resistant to linezolid 7 t064 United States (Massachusetts)
Mupirocin-resistant S. aureus NRS 107 YHGGFMBQBLQ Resistant to methicillin and mupirocin 59 t211  
Vancomycin-resistant S. aureus (VRSA) VRS1 TJMGMK Resistant to vancomycin t062 United States
  VRS2 TJMBMDMGMK Resistant to vancomycin, erythromycin, spectinomycin t002 United States
  VRS3a TJMBMDMGMK Resistant to vancomycin t002 United States
  VRS3b Resistant to vancomycin United States
  VRS4 TJMBMDMGMK Resistant to vancomycin, erythromycin, spectinomycin t002 United States
  VRS5 TJMBMDMGMK Resistant to vancomycin t002 United States
  VRS6 TJMGMK Resistant to vancomycin t062 United States
  VRS7 TJMBMDMGMK Resistant to vancomycin, β-lactams t002 United States
  VRS8 TJMBMDMGMK Resistant to vancomycin t002 United States
  VRS9 TJMBMDMGMK Resistant to vancomycin t002 United States
  VRS10 TJMBMDMGMK Resistant to vancomycin t002 United States
S. epidermidis NRS101 Prototype biofilm producer; resistant to methicillin, gentamicin United States
S. aureus ATCC 6538 Prototype biofilm producing strain