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. 2015 Apr 19;43(9):4758–4773. doi: 10.1093/nar/gkv321

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© The Author(s) 2015. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 7. — Expanded view of the binding interface of the of LiaR^(DBD)D191N bound to DNA sequences derived from the liaXYZ consensus and secondary sites. (A, B) The FEMs (Feature Enhanced Maps) are modified 2mF_obs-DF_model σA-weighted maps computed using phenix to reduce the model bias and retain the existing features (26). The (FEM-PHIFEM) electron density map is contoured at 0.6 absolute value of electrons/Å³ to show how Lys174, Lys177 and Thr178 interact with DNA. The consensus sequence bases are indicated as red color.