Table 2.
Fusion gene | Protein product | Head/tail gene locus | Distance | Head/tail joining sequence | Age/number |
---|---|---|---|---|---|
HARS2-ZMAT2 | Head gene-WT | 5q31.3/5q31.3 | 2 kb | 5′-CGTTGTCAAGAG-3′ | 19–71/9 |
Tail gene-AWTASC | 5′-ACAAAAAACTTG-3′ | ||||
BAIAP2L2-SLC16A8 | Head gene-WT | 22q13.1/22q13.1 | 1.9 kb | 5′-GGGGTCCGAGAC-3′ | 19–71/9 |
Tail gene-WT | 5′-CTGCTCCACTTC-3′ | ||||
KLK4-KLKP1 | Head gene-CTT | 19q13.1/19q13.1 | 20 kb | 5′-TGCTGGCGAACG-3′ | 19–71/10 |
Tail gene-NC | 5′-ATGCTGTGATTG-3′ | ||||
AZGP1-GJC3 | Chimera protein | 7q22.1/7q22.1 | 48 kb | 5′-ACGACAGTAACG-3′ | 19–71/10 |
Chimera protein | 5′-TTCCAGGAAGAA-3′ | ||||
SLC45A3-ELK4 | Chimera protein | 1q32.1/1q32.1 | 38 kb | 5′-CGGGAGAAGCAG-3′ | 19–71/9 |
Chimera protein | 5′-CTCATTGCTATGG-3′ | ||||
PRKAA1-TTC33 | Head gene-CTT | 5p13.1/5p13.1 | 17 kb | 5′-GTAGTATTGATG-3′ | 19–71/10 |
Tail gene-WT | 5′-AATGGCTTCCTT-3′ | ||||
C6orf47-BAG6 | Head gene-AWTASC | 6p21.3/6p21.3 | 8.5 kb | 5′-GGTGTGGCCTTG-3′ | 19–71/10 |
Tail gene-WT | 5′-AGACCTGTCGGC-3′ | ||||
ADCK4-NUMBL | Chimera protein | 19q13.2/19q13.2 | 6 kb | 5′-TTTGAAACCAAG-3′ | 22–71/7 |
Chimera protein | 5′-GGCGGACCCCGG-3′ | ||||
TTTY15-USP9Ya | Head gene-NC | Yq11.1/Yq11.1 | 15 kb | 5′-TTCTGACCTGTG-3′ | 15–75/19 |
Tail gene-WT | 5′-AGAGCTTGGAG-3′ | ||||
TTTY15-USP9Yb | Head gene-NC | Yq11.1/Yq11.1 | 15 kb | 5′-GTATTTTGGAAG-3′ | 15–56/16 |
Tail gene-WT | 5′-AGAGCTTGGAG-3′ | ||||
MALAT1-TNN | Head gene-NC | 11q13.1/2q31 | Infinite | 5′-ATGGGACAATAG-3′ | 21/1 |
Tail gene-AWTASC | 5′-TAATGTCGCTGG-3′ | ||||
MALAT1-WDR74a | Head gene-NC | 11q13.1/11q12.2 | 2.6 mb | 5′-CAGTAAGAAAAA-3′ | 21/1 |
Tail gene-WT | 5′-ATCAAGTGTAGT-3′ | ||||
MALAT1-WDR74b | Head gene-NC | 11q13.1/11q12.2 | 2.6 mb | 5′-TGGGTTAGAGAA-3′ | 21/1 |
Tail gene-AWTASC | 5′-GGAGTCTCACTC-3′ |
Transcripts were validated through RT-PCR and Sanger sequencing.
AWTASC, absence of wild-type ATG start codon; CTT, C-terminal truncation; NC, non-coding; WT, wild-type.