Table 1. Primers sequences.
RT-PCR | Primer name | F:5′-3′ | R:5′-3′ |
Pygo2 | CCTTCTCTGTCCCAACGATTT | CCAGGAAAGGGACTTGTGTTAG | |
E-Cadherin | AGCCATGTACGTTGCTATCC | CGTAGCACAGCTTCTCCTTAAT | |
β-actin | ATAGCACAGCCTGGATAGCAACGTAC | CACCTTCTACAATGAGCTGCGTGTG | |
Zeb2 | CCCATTCTGGTTCCTACAGTTC | GGGAAGAACCCGTCTTGATATT | |
Slug | AACTACAGCGAACTGGACAC | GAGGATCTCTGGTTGTGGTATG | |
Snail | CAGATGAGGACAGTGGGAAAG | GAGACTGAAGTAGAGGAGAAGGA | |
Kras | CAAGAGTGCCTTGACGATACA | GACCTGCTGTGTCGAGAATATC | |
shRNA | Pygo2-1 | GATCCGCCTGCATACTCACATCTGAT TCAAGA-GATCAGATGTGAGTATGCAG GTTTTTTACGCGTG |
AATTCACGCGTAAAAAACCTGCATAC TCACATCTGATCTCTTGAATCAGATGT GAGTATGCAGGCG |
Pygo2-2 | GATCCGCTCACATCTGACGGAGTTTTTC AAGAGAAAACTCCGTCAGATGTGAGTT TTTTACGCGTG |
AATTCACGCGTAAAAAACTCACATCTG ACGGAGTTTTCTCTTGAAAAACTCCGT CAGATGTGAGCG |
|
E-Cadherin | GATCCGCACCAAAGTCACGCTGAATTTC AAGAGAATTCAGCGTGACTTTGGTGTTT TTTACGCGTG |
AATTCACGCGTAAAAAACACCAAAGTC ACGCTGAATTCTCTTGAAATTCAGCGTGA CTTTGGTGCG |
|
Pbobi-cmv | Pygo2 | GCTCTAGAATGGATTACAAGGATGACGA CGATAAGGCCGCCTCGGCGCCGCCCCCA |
CCCTCGAGTCACCCATCGTTAGCAGCC AC |
Chip-RT-PCR | E-Cadherin-P1 | CAGTTGCTATGATGAGCCAAGA | GGGAAGTCAGTGTTCTCCTTTG |
E-Cadherin-P2 | CTCTCATTGGCCTCAATCTCTC | GCCACTGACCAGCTCATTTA | |
E-Cadherin-P3 | ACCACGCCTGGCTAATTT | GATCACGAGGTCAGGAGATTG | |
E-Cadherin-P4 | CTCACTAACCCATGAAGCTCTAC | GCCGAGGCTGATCTCAAAT | |
E-Cadherin-P5 | CACCTGTACTCCCAGCTACTA | GGTCTCACTCTTTCACCCAAG | |
Methylation | MSP for E-Cadherin Promoter-M | TGGGTAAGATAGAGCGAGATTTC | TCTCGAACTCCTAAACTAAAACGAT |
MSP for E-Cadherin Promoter-U | GGGTAAGATAGAGTGAGATTTTGT | TCTCAAACTCCTAAACTAAAACAAT | |
BSP for E-Cadherin Promoter | TTTTAGTAATTTTAGGTTAGAGGGTTAT | AAACTCACAAATACTTTACAATTCC |