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. 2015 Jun 30;47(1):54. doi: 10.1186/s12711-015-0134-4

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© Xiang et al. 2015

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 2 — Comparison of imputation accuracies obtained by different imputation scenarios in Landrace and Yorkshire breeds. 1 indicates that the reference population consisted of either 4166 LL or 4263 YY, depending on the respective breed (within-breed scenario); 2 indicates that the reference population consisted of 8429 combined LL and YY (combined-breed scenario) and 3 indicates that the reference population consisted of animals that belonged to another purebred breed (external-breed scenario), which means that Landrace animals were imputed using a reference population that contained Yorkshire pigs only and Yorkshire animals were imputed using a reference population that contained Landrace pigs only. Error bars are standard deviations