Table 7. Analysis of the differences between LIDC and the nine other methods for prediction of the top 100 proteins.

Data sets	Methods(M)	|M-LIDC|	Essential proteins in {M-LIDC}	Essential proteins in {LIDC-M}	Proportion of Essential proteins in {M-LIDC}	Proportion of Essential proteins in {LIDC-M}
YDIP_5093	DC	92	38	68	41%	74%
	BC	93	38	70	41%	75%
	NC	75	36	57	48%	76%
	LID	75	40	55	53%	73%
	PeC	77	56	56	73%	73%
	CoEWC	73	49	52	67%	71%
	WDC	73	46	53	63%	73%
	ION	79	58	56	73%	71%
	UC	44	30	30	68%	68%
YMIPS_4546	DC	83	12	55	14%	66%
	BC	83	12	54	14%	65%
	NC	63	8	49	13%	78%
	LID	61	10	51	16%	84%
	PeC	82	33	55	40%	67%
	CoEWC	74	30	50	41%	68%
	WDC	70	10	51	14%	73%
	ION	90	64	56	71%	62%
	UC	55	8	43	15%	78%

The results shown at the top of the table are for the YDIP_5093 PIN, while the results at the bottom of the table are for the YMIPS_4546 PIN.