Table 1. Mass spectrometry protein identification.
Comp a | Accession b | Gene c | Protein d | Score e | Coverage f | # Peptide g | # PSM h | MW (KDa) i | Aas k |
---|---|---|---|---|---|---|---|---|---|
CA | P0A8G6 | wrbA | NAD(P)H quinone dehydrogenase | 189.78 | 70.20 | 11 | 85 | 20.8 | 198 |
ZA | P0A8G6 | wrbA | NAD(P)H quinone dehydrogenase | 235.56 | 89.90 | 15 | 93 | 20.8 | 198 |
a) competitor used in the elution step;
b) alphanumeric unique protein sequence identifier provided by UniProtKB/Swiss-Prot protein knowledge base;
c) gene name;
d) protein name;
e) protein identification’s SEQUEST HT Score;
f) percentage of protein sequence covered by identified peptides;
g) total number of identified peptide sequences (peptide spectrum matches);
h) number of identified peptides matching to the protein;
i) theoretically calculated molecular weight;
k) number of amino acids.