| BioGrid |
http://thebiogrid.org |
Homo Sapiens, Caenorhabditis elegans, Drosophila melanogaster, Danio rerio, Gallus gallus, Sus scrufa, Bos taurus, Oryctolagus cuniculus, Mus musculus, Rattus norvegicus, Saccharomyces cerevisiae; distinguishes high-throughput assays |
| DIP |
http://dip.doe-mbi.ucla.edu/dip/ |
H.Sapiens, C.elegans, D.melanogaster, S.scrufa, B.taurus, O.cuniculus, M.musculus, R.norvegicus, S.cerevisiae; curated PPIs |
| InnateDB |
http://www.innatedb.com/ |
H.sapiens, M.musculs; PPIs involved in innate immune response |
| IntAct |
http://www.ebi.ac.uk/intact/ |
H.Sapiens, C.elegans, D.melanogaster, G.gallus, S.scrufa, B.taurus, M.musculus, R.norvegicus, S.cerevisiae; curated PPIs & direct user submissions |
| InteroPorc |
http://biodev.extra.cea.fr/interoporc/ |
H.sapiens, C.elegans, D.melanogaster, D.rerio, G.gallus, B.taurus, M.musculus, R.norvegicus, S.cerevisiae; validated & predicted PPIs |
| MatrixDB |
http://matrixdb.ibcp.fr/ |
H.sapiens; PPIs involving extracellular proteins |
| MINT |
http://mint.bio.uniroma2.it/mint/ |
H.Sapiens, C.elegans, D.melanogaster, D.rerio, G.gallus, B.taurus, O.cuniculus, M.musculus, R.norvegicus, S.cerevisiae; curated PPIs |
| SPIKE |
http://www.cs.tau.ac.il/∼spike/ |
H.sapiens; manually-curated pathway database |
| STRING |
http://string-db.org |
H.Sapiens, C.elegans, D.melanogaster, D.rerio, G.gallus, S.scrufa, B.taurus, O.cuniculus, M.musculus, R.norvegicus, S.cerevisiae; Integrative PPI database |
| TopFind |
http://clipserve.clip.ubc.ca/topfind |
H.sapiens, M.musculus; PPIs between proteases and substrates |
| Uniprot |
http://www.uniprot.org |
H.Sapiens, C.elegans, D.melanogaster, G.gallus, B.taurus, M.musculus, R.norvegicus, S.cerevisiae; Protein-centric resource, high-confidence PPIs selected from IntAct |
