Table 5. Distribution of differentially expressed transcription factor families.
TF family | DR vs CR | CR vs CL | ||
---|---|---|---|---|
Up-regulated | Down-regulated | Up-regulated | Down-regulated | |
MYB | 4 | 3 | 19 | 21 |
AP2/ERF | 1 | 0 | 17 | 14 |
Znf (WRKY) | 0 | 0 | 15 | 6 |
Znf (RING-finger) | 2 | 2 | 20 | 16 |
Znf | 19 | 5 | 104 | 103 |
NAC | 0 | 2 | 4 | 1 |
bZIP | 7 | 1 | 21 | 15 |
HSF | 0 | 0 | 2 | 2 |
Aux/IAA | 1 | 0 | 3 | 3 |
CBF | 1 | 0 | 18 | 1 |
DREB | 2 | 0 | 1 | 3 |
Each transcription factor contains known DNA-binding domains defined by the Pfam database.