Fig 4. All-atom root mean square deviation (RMSD) measured for different force field simulations of Fel d 1.
(A) AMBER, (B) CHARMM, (C) GROMOS. Color coding: Simulations without Ca2+ions (black), simulations with Ca2+ ions (red).
(A) AMBER, (B) CHARMM, (C) GROMOS. Color coding: Simulations without Ca2+ions (black), simulations with Ca2+ ions (red).