Table 2.
Microsatellite (MS) sequencing of Sarcocystis neurona (Sn) strains from six isolates from marine mammals stranded along the coast of the northeastern Pacific Ocean
| MS locus |
||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Sample | Year | Source | Ag Type | MS Type | Sn2 (GT)n |
Sn3 (AT)n |
Sn4 (CA)n |
Sn5 (CA)n |
Sn7 (CA)n |
Sn8 (CA)n |
Sn9 (GT)n |
Sn10 (AT)n |
Sn11 (CA)n |
Sn1520 (CTA)n |
Sn1863 (AC)n |
Sn515 complex Total nt count |
| SO3106 | 1999 | Wendte et al., 2010a | II | i | 9 | 12 | 12 | 9 | 17 | 10 | 17 | 11 | 13 | 9 | 17 | 120 |
| PP11 | 2011 | This study | VI | r | 10 | 11 | a | 9 | a | 10 | 14 | 10 | a | 14 | 16 | 81 |
| PV16 | 2011 | this study | XIII | hh | 9 | 10 | a | 10 | a | 10 | 14 | 9 | 14 | 10 | 22 | 81 |
| PV17 | 2011 | this study | ind | u | 10 | a | a | 9 | 18 | 10 | 14 | 9 | a | a | 15 | |
| PV18 | 2011 | this study | XIII | hh | 9 | 10 | a | 10 | 18 | a | 14 | 9 | 14 | 10 | 22 | |
| PV19 | 2011 | this study | ind | u | 10 | a | 13 | 9 | 18 | 10 | 14 | 9 | 14 | 14 | 15 | |
| PV22 | 2012 | this study | VI | p’ | 10 | 11 | 13 | 9 | 18 | 10 | 14 | 10 | 14 | 15 | 16 | |
SO, Sea Otter; PP, Harbour Porpoise; PV, Harbour Seal; nt, nucleotide.
a
Unable to assign numerical value for the number of repeats at the MS locus.
ind, indeterminate; unable to assign a strain genotype.
Specimens are grayscale shaded to reflect different antigen (Ag) and MS types.
Empty cells represent a lack of available data.
SO3106 serves as a reference sequence (Wendte et al., 2010a).