Table 2.
Transcriptome reference assembly and annotation statistics.
| Steps | Categories | Number/Length |
|---|---|---|
| Assembly | Number of contigs | 53,440 |
| Maximum contig length | 13,690 bp | |
| Minimum contig length | 201 bp | |
| Average contig length | 917 bp | |
| Median contig length | 476 bp | |
| N50 length | 1686 bp | |
| Annotation | Contigs with blast hits to NR * | 38,382 |
| Contigs with blast hits to UniProt | 37,809 | |
| Contigs with blast hits to Zebrafish proteins | 38,559 | |
| Unigenes predicted | 19,972 | |
| Unigenes with GO terms | 10,988 |
* The “NR” is the abbreviation of non-redundant database.