Table 1.
Sequencing statistics
Sample | Total reads x 106 | non-rRNA reads x 106 | rRNAs reads x 106 | % mRNA |
---|---|---|---|---|
RL_4_0ha | 62.35 | 53.46 | 8.90 | 85.73 |
RL_4_24h | 58.75 | 53.15 | 5.61 | 90.46 |
RL_4_144h | 56.54 | 49.01 | 7.53 | 86.69 |
RL_RT_0hb | 75.05 | 68.82 | 6.23 | 91.70 |
RL_RT_24h | 73.05 | 61.26 | 11.80 | 85.85 |
RL_RT_144h | 66.58 | 56.07 | 10.51 | 84.22 |
RP_RT_0hc | 72.28 | 64.21 | 8.07 | 88.84 |
RP_RT_24h | 81.60 | 48.59 | 33.01 | 59.55 |
RP_RT_144h | 92.74 | 28.33 | 64.40 | 30.55 |
K1d | 94.39 | 91.65 | 2.74 | 97.10 |
K2 | 77.01 | 75.58 | 1.43 | 98.15 |
K3 | 78.33 | 76.91 | 1.42 | 98.19 |
Total reads obtained from Illumina HiSeq sequencing were submitted to the SortMeRNA database to identify rRNA sequences within the dataset
aRL, RNA Later; 4, 4 °C
bRT, room temperature
cRP, RNA Protect
dSnap frozen control