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. Author manuscript; available in PMC: 2016 Jul 15.
Published in final edited form as: J Immunol. 2015 Jun 10;195(2):706–716. doi: 10.4049/jimmunol.1403190

Table I.

Summary of best fit values for parameters in Scheme V

Parameter HA peptide CLIP peptide
k1 (min−1) 0.022 0.022
k-1 (min−1) 0.0033 0.0033
k2 (μM−1min−1) 0.16 0.054
k-2 (min−1) 0.013 0.029
k3 (min−1) 0.0093 0.083
k-3 (min−1) 10−5 0.0058
k4 (μM−1min−1) 2.23 2.23
k-4 (min−1) a 0 0
k5 (min−1) 0.36 0.36
k-5 (μM−1min−1) a 0 0
k6 (μM−1min−1) 5.42 5.21
k-6 (min−1) 10−5 0.022
k7 (min−1) 0.012 0.014
k-7 (μM−1min−1) 10−5 0.020
a

The values of k-4 and k-5 were set to 0, to simulate that DM only interacts with active MHC II and DM-MHC II complex resolves into inactive MHC II in the absence of peptides.