Table 1.
Genes of interest included in the RT-PCR analysis of rectosigmoid mucosa
| Gene Symbol | Refseq No. | Official Full Name |
|---|---|---|
| C4BPA | NM_000715 | Complement component 4 binding protein, alpha |
| CCL20 | NM_004591 | Chemokine (C-C motif) ligand 20 |
| CLDN1 | NM_021101 | Claudin 1 |
| FGFR4 | NM_002011 | Fibroblast growth factor receptor 4 |
| FN1 | NM_002026 | Fibronectin 1 |
| GPBAR1 | NM_170699 | G protein-coupled bile acid receptor 1 (syn. TGR5) |
| GUCA2B | NM_007102 | Guanylate cyclase activator 2B (uroguanylin) |
| IFIT3 | NM_001549 | Interferon-induced protein with tetratricopeptide repeats 3 |
| NR1H4 | NM_005123 | Nuclear receptor subfamily 1, group H, member 4 (syn. Farnesoid X receptor) |
| OCLN | NM_002538 | Occludin |
| P2RY4 | NM_002565 | Pyrimidinergic receptor P2Y, G-protein coupled, 4 |
| PDZD3 | NM_024791 | PDZ domain containing 3 |
| RBP2 | NM_004164 | Retinol binding protein 2, cellular |
| SLC10A2 | NM_000452 | Solute carrier family 10 (sodium/bile acid cotransporter family), member 2 (syn. Apical Sodium-coupled Bile acid transporter) |
| SLC6A4 | NM_001045 | Solute carrier family 6 (neurotransmitter transporter, serotonin), member 4 (syn. Serotonin transporter) |
| TFF1 | NM_003225 | Trefoil factor 1 |
| TJP1 | NM_175610 | Tight junction protein 1 (syn. zonula occludens 1) |
| TNFSF15 | NM_005118 | Tumor necrosis factor (ligand) superfamily, member 15 |
| VIP | NM_003381 | Vasoactive intestinal peptide |
| ACTB | NM_001101 | Actin, beta (housekeeping gene) |
| GAPDH | NM_002046 | Glyceraldehyde-3-phosphate dehydrogenase (housekeeping gene) |
| HGDC | SA_00105 | Human Genomic DNA Contamination |
| RTC | SA_00104 | Reverse Transcription Control |
| PPC | SA_00103 | Positive PCR Control |
Syn., synonym.